STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap42Rho GTPase activating protein 42b. (921 aa)    
Predicted Functional Partners:
arhgap10
Rho GTPase activating protein 10.
  
 
  
0.481
LOC113167989
Uncharacterized protein.
    
 0.480
LOC113154257
Uncharacterized protein.
    
 0.480
RHOB
Ras homolog family member B.
    
 0.480
LOC113167010
Uncharacterized protein.
    
 0.480
LOC113167459
Uncharacterized protein.
    
 0.480
LOC113167461
Uncharacterized protein.
    
 0.480
LOC113155463
Ras homolog family member Ca.
    
 0.480
rnd3
Rho family GTPase 3a.
    
 0.463
RND1
Rho family GTPase 1.
    
 0.463
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.