Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSATEP00000018229 | brix1 | ENSATEP00000018229 | ENSATEP00000023987 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix domain containing 2. | 0.998 |
ENSATEP00000018229 | ebna1bp2 | ENSATEP00000018229 | ENSATEP00000029645 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | EBNA1 binding protein 2. | 0.996 |
ENSATEP00000018229 | grwd1 | ENSATEP00000018229 | ENSATEP00000032840 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Glutamate-rich WD repeat containing 1. | 0.911 |
ENSATEP00000018229 | noc2l | ENSATEP00000018229 | ENSATEP00000026619 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | NOC2-like nucleolar associated transcriptional repressor. | 0.997 |
ENSATEP00000018229 | pwp1 | ENSATEP00000018229 | ENSATEP00000020191 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | PWP1 homolog, endonuclein. | 0.966 |
ENSATEP00000018229 | rbm34 | ENSATEP00000018229 | ENSATEP00000023867 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | RNA binding motif protein 34. | 0.948 |
ENSATEP00000018229 | rpf2 | ENSATEP00000018229 | ENSATEP00000018447 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosome production factor 2 homolog. | 0.998 |
ENSATEP00000018229 | rsl1d1 | ENSATEP00000018229 | ENSATEP00000013217 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal L1 domain containing 1. | 0.996 |
ENSATEP00000018229 | sdad1 | ENSATEP00000018229 | ENSATEP00000022867 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.997 |
ENSATEP00000018229 | wdr3 | ENSATEP00000018229 | ENSATEP00000001107 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | WD repeat domain 3. | 0.958 |
brix1 | ENSATEP00000018229 | ENSATEP00000023987 | ENSATEP00000018229 | Brix domain containing 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.998 |
brix1 | ebna1bp2 | ENSATEP00000023987 | ENSATEP00000029645 | Brix domain containing 2. | EBNA1 binding protein 2. | 0.999 |
brix1 | grwd1 | ENSATEP00000023987 | ENSATEP00000032840 | Brix domain containing 2. | Glutamate-rich WD repeat containing 1. | 0.945 |
brix1 | noc2l | ENSATEP00000023987 | ENSATEP00000026619 | Brix domain containing 2. | NOC2-like nucleolar associated transcriptional repressor. | 0.998 |
brix1 | pwp1 | ENSATEP00000023987 | ENSATEP00000020191 | Brix domain containing 2. | PWP1 homolog, endonuclein. | 0.977 |
brix1 | rbm34 | ENSATEP00000023987 | ENSATEP00000023867 | Brix domain containing 2. | RNA binding motif protein 34. | 0.991 |
brix1 | rpf2 | ENSATEP00000023987 | ENSATEP00000018447 | Brix domain containing 2. | Ribosome production factor 2 homolog. | 0.996 |
brix1 | rsl1d1 | ENSATEP00000023987 | ENSATEP00000013217 | Brix domain containing 2. | Ribosomal L1 domain containing 1. | 0.998 |
brix1 | sdad1 | ENSATEP00000023987 | ENSATEP00000022867 | Brix domain containing 2. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.872 |
brix1 | wdr3 | ENSATEP00000023987 | ENSATEP00000001107 | Brix domain containing 2. | WD repeat domain 3. | 0.875 |
page 1 of 6