STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000020602tRNA phosphotransferase 1. (251 aa)    
Predicted Functional Partners:
nudt22
Nudix (nucleoside diphosphate linked moiety X)-type motif 22.
 
 
  
 0.680
rtcb
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
     
 0.659
aacs
Acetoacetyl-CoA synthetase.
     
 0.621
LOC113161248
Solute carrier family 27 member 1b.
     
 0.621
LOC113172490
Acetyl-coenzyme A synthetase.
     
 0.621
ENSATEP00000032001
Acyl-CoA synthetase short chain family member 1.
     
 0.621
ENSATEP00000033828
Acyl-CoA synthetase short chain family member 3.
     
 0.621
LOC113166757
Acyl-CoA synthetase short chain family member 2.
     
 0.621
ENSATEP00000015917
Poly [ADP-ribose] polymerase.
     
 0.598
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
  
 0.597
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.