STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113162508Uncharacterized protein. (662 aa)    
Predicted Functional Partners:
PUF60
Poly-U binding splicing factor b.
   
 
 0.766
LOC113163969
Uncharacterized protein.
   
 
 0.766
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
   
 0.719
exosc2
Exosome component 2.
   
  0.675
dcp2
Decapping mRNA 2.
     
 0.598
exosc5
Exosome component 5.
     
 0.585
exosc7
Exosome component 7.
   
 
  0.576
exosc4
Exosome component 4.
   
 
  0.575
dis3
DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
     
 0.569
exosc3
Exosome component 3.
   
 
  0.568
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.