STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sh3bp5SH3-domain binding protein 5b (BTK-associated). (470 aa)    
Predicted Functional Partners:
LOC113171092
RAB11a, member RAS oncogene family, like.
    
 
 0.659
LOC113171704
Uncharacterized protein.
    
 
 0.659
rab11a
RAB11a, member RAS oncogene family.
    
 
 0.659
LOC113152832
RAB11B, member RAS oncogene family, b.
    
 
 0.659
LOC113152082
RAB11B, member RAS oncogene family, a.
    
 
 0.659
LOC113165283
RAB, member of RAS oncogene family-like 2.
    
 
 0.533
rab25
RAB25, member RAS oncogene family b.
    
 
 0.533
LOC113155496
RAB25, member RAS oncogene family a.
    
 
 0.533
LOC113168983
Reticulon 4 receptor-like 1a.
      
 0.526
LOC113174767
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
   
  
 0.489
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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