STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113159049LMBR1 domain containing 2b. (704 aa)    
Predicted Functional Partners:
ENSATEP00000004052
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
    0.491
capsl
Calcyphosine-like b.
 
 
  
 0.480
esf1
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
      
 0.444
pigo
Phosphatidylinositol glycan anchor biosynthesis, class O.
      
 0.418
hmg20b
High mobility group 20B.
      
 0.406
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.