STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGB13289.1PFAM: ABC-2 type transporter; KEGG: slt:Slit_2514 ABC-2 type transporter. (379 aa)    
Predicted Functional Partners:
EGB13290.1
KEGG: slt:Slit_2512 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.997
EGB13291.1
PFAM: secretion protein HlyD family protein; KEGG: dvm:DvMF_2157 secretion protein HlyD family protein.
 
  
 0.959
EGB13288.1
PFAM: ABC-2 type transporter; KEGG: dvm:DvMF_2155 ABC-2 type transporter.
 
  
 
0.895
EGB15426.1
KEGG: lhk:LHK_02239 YhiH; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase.
 
 
0.768
EGB15427.1
PFAM: secretion protein HlyD family protein; KEGG: oan:Oant_1823 secretion protein HlyD family protein.
 
  
 0.748
EGB16167.1
KEGG: bbe:BBR47_45290 ABC transporter ATP binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.727
EGB13292.1
Regulatory protein MarR; KEGG: mfa:Mfla_2359 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
       0.671
EGB13758.1
KEGG: dde:Dde_1770 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 0.663
EGB13890.1
PFAM: protein of unknown function DUF181; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: dsa:Desal_2610 protein of unknown function DUF181.
  
  
 0.597
EGB14423.1
PFAM: secretion protein HlyD family protein; KEGG: dde:Dde_0825 hypothetical protein.
 
  
 0.594
Your Current Organism:
Desulfovibrio desulfuricans ND132
NCBI taxonomy Id: 641491
Other names: D. desulfuricans ND132, Desulfovibrio [desulfuricans] ND132, Desulfovibrio desulfuricans str. ND132, Desulfovibrio desulfuricans strain ND132, Desulfovibrio sp. ND132
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