STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGB14781.1KEGG: dsa:Desal_2475 hypothetical protein. (102 aa)    
Predicted Functional Partners:
EGB14782.1
PFAM: ketose-bisphosphate aldolase class-II; KEGG: dal:Dalk_5159 ketose-bisphosphate aldolase class-II.
       0.469
EGB14776.1
KEGG: cak:Caul_0720 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver.
       0.441
EGB14777.1
KEGG: aeh:Mlg_2832 hypothetical protein.
       0.441
EGB14778.1
KEGG: dak:DaAHT2_2579 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
       0.441
EGB14779.1
KEGG: ppd:Ppro_1528 ABC transporter substrate-binding protein.
       0.441
EGB14780.1
KEGG: dps:DP1407 serine/threonine phosphatase family protein; PFAM: Stage II sporulation protein E; histidine kinase HAMP region domain protein; Cache domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein.
       0.441
Your Current Organism:
Desulfovibrio desulfuricans ND132
NCBI taxonomy Id: 641491
Other names: D. desulfuricans ND132, Desulfovibrio [desulfuricans] ND132, Desulfovibrio desulfuricans str. ND132, Desulfovibrio desulfuricans strain ND132, Desulfovibrio sp. ND132
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.