STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGB15073.1Hypothetical protein; Manually curated; KEGG: dsa:Desal_1754 hypothetical protein. (125 aa)    
Predicted Functional Partners:
EGB15075.1
KEGG: dde:Dde_0770 hypothetical protein.
 
     0.952
EGB15079.1
PFAM: protein of unknown function DUF214; KEGG: dde:Dde_0730 hypothetical protein.
 
     0.875
EGB15080.1
KEGG: dsa:Desal_1757 hypothetical protein.
 
     0.864
EGB15082.1
PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: dde:Dde_0728 hypothetical protein.
 
     0.860
EGB15077.1
PFAM: protein of unknown function DUF214; KEGG: dma:DMR_19900 putative ABC transporter permease protein.
 
     0.847
EGB15074.1
KEGG: dal:Dalk_1051 hypothetical protein.
       0.803
EGB15078.1
KEGG: dde:Dde_0731 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.779
EGB15824.1
KEGG: dde:Dde_0722 ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
  
     0.770
EGB15493.1
KEGG: dde:Dde_0735 hypothetical protein.
 
     0.752
EGB15232.1
PFAM: Glycosyltransferase 28 domain; KEGG: dde:Dde_0739 hypothetical protein.
 
     0.748
Your Current Organism:
Desulfovibrio desulfuricans ND132
NCBI taxonomy Id: 641491
Other names: D. desulfuricans ND132, Desulfovibrio [desulfuricans] ND132, Desulfovibrio desulfuricans str. ND132, Desulfovibrio desulfuricans strain ND132, Desulfovibrio sp. ND132
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.