STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGB15338.1KEGG: dma:DMR_35940 hypothetical protein. (452 aa)    
Predicted Functional Partners:
EGB15339.1
KEGG: dsa:Desal_0047 hypothetical protein.
 
  
 0.966
EGB15337.1
C_GCAxxG_C_C family protein; KEGG: dvu:DVU0733 hypothetical protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein.
 
     0.819
EGB15340.1
KEGG: dma:DMR_35920 hypothetical protein.
       0.803
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.792
EGB15336.1
PFAM: methyltransferase small; KEGG: dsa:Desal_0045 methyltransferase type 11; Belongs to the methyltransferase superfamily.
       0.792
EGB15341.1
KEGG: dma:DMR_35910 hypothetical protein.
       0.773
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.743
EGB15827.1
PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: syw:SYNW1044 putative SOS mutagenesis protein UmuD; Belongs to the peptidase S24 family.
   
  
 0.686
EGB13425.1
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: ddf:DEFDS_0397 hypothetical protein.
  
     0.626
EGB15075.1
KEGG: dde:Dde_0770 hypothetical protein.
  
     0.589
Your Current Organism:
Desulfovibrio desulfuricans ND132
NCBI taxonomy Id: 641491
Other names: D. desulfuricans ND132, Desulfovibrio [desulfuricans] ND132, Desulfovibrio desulfuricans str. ND132, Desulfovibrio desulfuricans strain ND132, Desulfovibrio sp. ND132
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.