STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGB15511.1KEGG: cts:Ctha_1815 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein. (326 aa)    
Predicted Functional Partners:
EGB15512.1
PFAM: protein of unknown function DUF107; KEGG: dps:DP1870 hypothetical protein.
 
  
 0.960
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.884
EGB15513.1
PFAM: MOSC domain containing protein; KEGG: dde:Dde_2836 MOSC domain-containing protein.
       0.576
EGB14996.1
HflK protein; HflC and HflK could encode or regulate a protease.
  
   
 0.509
EGB16162.1
PFAM: Type II secretion system F domain; KEGG: dde:Dde_2365 hypothetical protein.
   
    0.491
yidC
Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
 
 0.487
EGB15291.1
KEGG: mbn:Mboo_1172 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat.
  
 
 0.477
EGB14034.1
PFAM: peptidase M16 domain protein; KEGG: dsa:Desal_1469 peptidase M16 domain protein; Belongs to the peptidase M16 family.
  
 0.458
hflX
GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
  
  
 0.458
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.451
Your Current Organism:
Desulfovibrio desulfuricans ND132
NCBI taxonomy Id: 641491
Other names: D. desulfuricans ND132, Desulfovibrio [desulfuricans] ND132, Desulfovibrio desulfuricans str. ND132, Desulfovibrio desulfuricans strain ND132, Desulfovibrio sp. ND132
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.