STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGB16409.1KEGG: dsa:Desal_3068 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein. (414 aa)    
Predicted Functional Partners:
EGB13443.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: dsa:Desal_2718 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver.
  
 0.970
EGB14762.1
Diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; GAF domain protein; KEGG: dsa:Desal_0916 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.902
EGB14062.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold domain protein; KEGG: dsa:Desal_1488 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; response regulator receiver; PAS domain containing protein.
 
 0.880
EGB14891.1
Diguanylate cyclase; SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: dal:Dalk_4326 diguanylate cyclase; PFAM: GGDEF domain containing protein.
  
 0.860
EGB16441.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: dvm:DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: GGDEF domain containing protein; PAS domain containing protein.
 
 0.860
EGB14796.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: dma:DMR_39840 putative response regulator; SMART: GGDEF domain containing protein; response regulator receiver.
 
 
 0.851
EGB15035.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: dvm:DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.845
EGB15204.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: rfr:Rfer_4028 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
  
 0.837
EGB15577.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dsa:Desal_3710 diguanylate cyclase; SMART: GGDEF domain containing protein.
  
 0.834
EGB14919.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dat:HRM2_38790 GGDEF domain family protein; SMART: GGDEF domain containing protein.
  
 0.829
Your Current Organism:
Desulfovibrio desulfuricans ND132
NCBI taxonomy Id: 641491
Other names: D. desulfuricans ND132, Desulfovibrio [desulfuricans] ND132, Desulfovibrio desulfuricans str. ND132, Desulfovibrio desulfuricans strain ND132, Desulfovibrio sp. ND132
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.