STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR71627.1Mobilization protein; Overlaps CDS with the same product name; overlaps another CDS with the same product name. (367 aa)    
Predicted Functional Partners:
EPR71628.1
Mobilization protein; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
 
     0.896
EPR67208.1
Sulfur carrier protein adenylyltransferase ThiF.
  
 0.892
EPR69952.1
Transferase hexapeptide repeat protein.
  
 0.736
EPR68753.1
Serine acetyltransferase.
  
 0.736
EPR71518.1
Ferredoxin--sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.729
EPR70526.1
D-3-phosphoglycerate dehydrogenase.
  
 0.723
EPR70527.1
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.723
EPR66844.1
Homoserine dehydrogenase.
  
 
 0.687
EPR70892.1
D-alanine--D-alanine ligase.
  
 
 0.680
metZ
O-acetylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 0.636
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.