STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR71283.1Amino acid ABC transporter, amino acid-binding protein. (84 aa)    
Predicted Functional Partners:
EPR70550.1
Putative signal transduction histidine kinase.
   
 0.722
EPR70551.1
Histidine kinase sensor protein.
   
 0.722
EPR68004.1
Hypothetical protein.
   
 0.722
EPR69272.1
Multi-sensor hybrid histidine kinase.
   
 0.716
EPR65028.1
PAS domain protein.
   
 0.709
EPR68104.1
Hypothetical protein.
   
 0.700
EPR68534.1
Sensory box histidine kinase/response regulator.
   
 0.694
EPR71374.1
PAS/PAC domain protein.
    
 0.691
EPR70552.1
Sensory box histidine kinase/response regulator.
    
 0.691
EPR68471.1
Multi-sensor signal transduction histidine kinase.
   
 0.691
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.