STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR70443.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
EPR71439.1
Hypothetical protein.
 
  0.849
EPR68070.1
Protein of unknown function DUF1549.
 
  0.849
EPR67636.1
Hypothetical protein.
 
  0.849
EPR66684.1
Hypothetical protein.
 
  0.849
EPR67143.1
Hypothetical protein.
 
  0.848
EPR66990.1
Protein of unknown function DUF1549.
 
  0.848
EPR66682.1
Hypothetical protein.
 
  0.848
EPR66683.1
Putative protein-signal peptide and transmembrane prediction.
 
  0.848
EPR69856.1
Protein of unknown function DUF1549.
 
  0.847
EPR67348.1
Hypothetical protein.
 
  0.846
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.