STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR69522.1Gluconolactonase. (280 aa)    
Predicted Functional Partners:
EPR68877.1
Glucose dehydrogenase, PQQ-dependent.
     
 0.786
EPR67694.1
Glucose dehydrogenase, PQQ-dependent.
     
 0.786
EPR69521.1
Putative outer membrane protein, OMP85 family.
       0.773
EPR65377.1
Glucose dehydrogenase, PQQ-dependent.
     
 0.733
EPR69520.1
Hypothetical protein.
       0.723
EPR70931.1
Gluconolactonase.
  
  
 
0.709
EPR67588.1
Putative protein-signal peptide and transmembrane prediction.
  
 
  0.682
EPR65441.1
Putative protein-signal peptide and transmembrane prediction.
  
 
  0.682
EPR65847.1
Gluconolactonase.
  
  
 
0.628
EPR71441.1
Aldehyde reductase.
   
 
  0.611
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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