STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR69573.1Hypothetical protein. (415 aa)    
Predicted Functional Partners:
EPR68877.1
Glucose dehydrogenase, PQQ-dependent.
  
  0.698
EPR68585.1
Glucose dehydrogenase, PQQ-dependent.
  
  0.698
EPR67694.1
Glucose dehydrogenase, PQQ-dependent.
  
  0.698
EPR66618.1
Copper-containing nitrite reductase.
  
  0.672
EPR66408.1
Glutamate synthase [NADPH] large chain.
    
  0.649
EPR66409.1
Glutamate synthase [NADPH] large chain; Overlaps another CDS with the same product name.
    
  0.649
EPR66410.1
Glutamate synthase [NADPH] large chain; Overlaps another CDS with the same product name.
    
  0.649
EPR66411.1
Glutamate synthase [NADPH] large chain; Overlaps another CDS with the same product name; Belongs to the glutamate synthase family.
    
  0.649
EPR66891.1
Hypothetical protein.
  
     0.643
EPR70534.1
Molybdopterin binding protein; C-terminal domain of CinA type S; Belongs to the CinA family.
  
 
  0.642
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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