STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR69654.1PF00070 family, FAD-dependent NAD(P)-disulfide oxidoreductase; Overlaps CDS with the same product name; overlaps another CDS with the same product name. (80 aa)    
Predicted Functional Partners:
EPR68835.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
  
 0.987
EPR69653.1
PF00070 family, FAD-dependent NAD(P)-disulfide oxidoreductase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
     0.945
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.865
EPR67869.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.850
EPR69652.1
Hypothetical protein.
 
     0.808
EPR70553.1
Ribose-phosphate pyrophosphokinase.
   
 0.806
EPR68893.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.749
EPR68894.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.749
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
    
 0.741
EPR70535.1
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
  
  0.737
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.