STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR69089.1Isoquinoline 1-oxidoreductase beta subunit. (718 aa)    
Predicted Functional Partners:
EPR69088.1
Isoquinoline 1-oxidoreductase alpha subunit.
 0.995
EPR70579.1
Isoquinoline 1-oxidoreductase alpha subunit.
 0.982
EPR66690.1
Isoquinoline 1-oxidoreductase alpha subunit.
 0.978
EPR68124.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
 
 0.880
EPR67786.1
CTP:molybdopterin cytidylyltransferase.
 
  
 0.819
EPR71151.1
Glutamate synthase [NADPH] small chain.
  
 
 0.660
EPR71152.1
Glutamate synthase [NADPH] small chain.
  
 
 0.660
ade
Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
    
  0.495
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
    
  0.494
tadA
tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.492
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.