STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR68996.1Amidohydrolase 2. (345 aa)    
Predicted Functional Partners:
EPR67514.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.642
EPR68348.1
Uncharacterized protein ygiD.
 
  
 0.589
EPR68589.1
Hypothetical protein.
  
     0.496
EPR71112.1
Hypothetical protein.
  
     0.479
EPR68590.1
Putative protein-transmembrane prediction.
  
     0.468
EPR68289.1
Hypothetical protein.
  
     0.461
EPR71111.1
Hypothetical protein.
  
     0.455
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
     
 0.448
EPR66877.1
Sialidase.
  
    0.414
EPR68876.1
Putative large multi-functional protein.
  
     0.405
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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