STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR68857.1Arylsulfatase. (554 aa)    
Predicted Functional Partners:
EPR65474.1
Arylsulfatase.
  
     0.721
EPR66927.1
Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1); Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
 
   0.574
EPR68858.1
Hypothetical protein.
       0.563
EPR66928.1
Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1); Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
 
   0.472
EPR69517.1
GldJ.
  
 
   0.423
proS
Prolyl-tRNA synthetase, bacterial type; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
       0.419
EPR68855.1
DUF1432 domain-containing protein.
       0.413
EPR68856.1
Hypothetical protein.
       0.413
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.