STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR68861.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
EPR68862.1
Hypothetical protein.
     0.984
EPR66309.1
Hypothetical protein.
  
     0.631
EPR65785.1
Hypothetical protein.
  
     0.631
EPR65700.1
Hypothetical protein.
  
     0.583
EPR69509.1
TPR domain protein.
  
     0.582
EPR68427.1
Hypothetical protein.
  
     0.571
EPR66712.1
Hypothetical protein.
  
     0.571
EPR69519.1
Putative uroporphyrinogen-III synthase HemD.
  
     0.570
EPR67278.1
Ribosome hibernation protein YhbH.
  
     0.557
EPR68952.1
Hypothetical protein.
  
     0.548
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.