STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR68873.1Ketosteroid isomerase-related protein. (158 aa)    
Predicted Functional Partners:
EPR67003.1
Putative isomerase yddE, PhzC-PhzF family.
  
 
  0.552
EPR68872.1
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase.
       0.476
EPR71258.1
Hypothetical protein.
    
 0.449
EPR68162.1
Alpha/beta hydrolase fold-3 domain protein.
    
 0.449
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
   
 
  0.443
EPR66505.1
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
   
 
  0.443
EPR66987.1
FG-GAP repeat domain protein.
  
     0.435
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.