STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR68894.12-oxoglutarate dehydrogenase E1 component. (100 aa)    
Predicted Functional Partners:
EPR68896.1
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
 
 0.994
EPR68895.1
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
 
 0.991
EPR68893.1
2-oxoglutarate dehydrogenase E1 component.
     0.990
EPR70535.1
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
 
 0.972
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.972
EPR67485.1
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.966
EPR67486.1
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.962
EPR68835.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
   
 0.916
EPR70553.1
Ribose-phosphate pyrophosphokinase.
    
 0.903
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
 
 0.878
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.