STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR68561.1Putative oxidoreductase. (315 aa)    
Predicted Functional Partners:
EPR68560.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.773
EPR68563.1
Short-chain dehydrogenase/reductase SDR.
 
  
  0.773
EPR68562.1
Putative oxidoreductase.
 
 
  0.703
EPR67668.1
Aldo/keto reductase.
 
     0.685
EPR68565.1
Putative short-chain dehydrogenase family protein.
 
  
  0.664
EPR69469.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.624
EPR68564.1
Hypothetical protein.
    
  0.612
EPR68566.1
Endoribonuclease L-PSP.
  
    0.544
EPR71442.1
Oxidoreductase of aldo/keto reductase family, subgroup 1.
 
 0.538
EPR68568.1
Alkaline ceramidase domain protein.
 
     0.530
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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