STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR68084.1Putative ABC transporter permease. (104 aa)    
Predicted Functional Partners:
EPR68088.1
ABC transporter, permease protein.
 
  0.986
EPR68085.1
ABC transporter, permease protein.
 
  0.960
EPR68086.1
Putative ABC transporter permease.
 
  0.960
EPR68090.1
ABC transporter permease; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.895
EPR68089.1
ABC transporter ATP-binding protein.
 
  0.891
EPR68080.1
ABC transporter, ATP-binding protein.
 
  0.889
EPR68093.1
Putative two-component system sensor histidine kinase.
 
     0.809
EPR68323.1
Sigma-54 dependent DNA-binding response regulator, Fis family.
  
     0.765
EPR68322.1
Two-component system sensor histidine kinase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
 
     0.758
EPR68321.1
Two-component system sensor histidine kinase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
 
     0.751
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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