STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR67946.1Protein YicC. (137 aa)    
Predicted Functional Partners:
EPR67947.1
Protein YicC.
     0.971
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.611
EPR66408.1
Glutamate synthase [NADPH] large chain.
  
    0.572
EPR66409.1
Glutamate synthase [NADPH] large chain; Overlaps another CDS with the same product name.
  
    0.572
EPR66410.1
Glutamate synthase [NADPH] large chain; Overlaps another CDS with the same product name.
  
    0.572
EPR66411.1
Glutamate synthase [NADPH] large chain; Overlaps another CDS with the same product name; Belongs to the glutamate synthase family.
  
    0.572
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
  
    0.566
EPR67948.1
Hypothetical protein.
       0.565
EPR66397.1
Cytoplasmic axial filament protein CafA and Ribonuclease G; Overlaps another CDS with the same product name.
  
     0.484
EPR66398.1
Cytoplasmic axial filament protein CafA and Ribonuclease G; Overlaps another CDS with the same product name.
  
     0.427
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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