STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR67801.1Oxidoreductase. (447 aa)    
Predicted Functional Partners:
EPR67802.1
Putative multi-domain protein.
 
     0.790
EPR65109.1
Putative secreted glycosyl hydrolase.
  
     0.695
EPR65491.1
Hypothetical protein.
  
    0.673
EPR69349.1
Putative secreted glycosyl hydrolase.
  
     0.650
EPR65538.1
Hypothetical protein.
  
    0.630
EPR70821.1
Hypothetical protein.
  
     0.588
EPR67590.1
Hypothetical protein.
  
    0.579
EPR65688.1
Putative secreted glycosyl hydrolase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
     0.538
EPR66982.1
Myo-inositol 2-dehydrogenase.
  
     0.537
EPR67803.1
Hypothetical protein.
       0.507
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.