STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR67655.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
EPR67537.1
Putative zinc-binding dehydrogenase.
 
 
  0.658
EPR66680.1
Beta-hexosaminidase precursor.
 
     0.489
EPR66996.1
Hypothetical protein.
  
     0.442
EPR67654.1
L-sorbosone dehydrogenase.
       0.419
EPR69338.1
Hypothetical protein.
  
     0.407
EPR67656.1
Cytochrome c oxidase polypeptide II.
       0.407
EPR68070.1
Protein of unknown function DUF1549.
 
     0.406
EPR69451.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.