STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR67399.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
EPR67398.1
Hypothetical protein.
 
     0.865
EPR67397.1
Internalin A (LPXTG motif).
 
     0.835
EPR68754.1
Hypothetical protein.
  
     0.756
EPR69397.1
Hypothetical protein.
  
     0.735
EPR69201.1
Hypothetical protein.
  
     0.729
EPR68834.1
Hypothetical protein.
  
     0.720
EPR67400.1
Hypothetical protein.
       0.708
EPR65827.1
Hypothetical protein.
  
     0.692
EPR65258.1
Hypothetical protein.
  
     0.669
EPR67948.1
Hypothetical protein.
  
     0.668
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.