STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR67512.1Hypothetical protein. (305 aa)    
Predicted Functional Partners:
EPR67511.1
Hypothetical protein.
 
     0.803
EPR68426.1
TonB-dependent receptor.
  
     0.696
EPR66782.1
Putative transmembrane protein.
 
  
 0.681
EPR65125.1
Hypothetical protein.
  
     0.672
EPR66828.1
Glucosamine-6-phosphate deaminase.
  
     0.662
EPR67162.1
Hypothetical protein.
  
     0.606
EPR68525.1
Pyrimidine regulatory protein PyrR; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
     0.578
EPR66674.1
Tetratricopeptide repeat domain protein.
  
     0.577
EPR68406.1
CHU large protein.
  
 
   0.547
EPR68684.1
Hypothetical protein.
  
     0.542
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.