STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR67274.1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (342 aa)    
Predicted Functional Partners:
EPR69175.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.969
EPR70932.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 0.813
EPR67834.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
0.776
EPR70933.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.727
EPR66561.1
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.725
EPR67201.1
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.702
EPR66329.1
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.698
EPR65773.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
    
 0.698
EPR71389.1
dTDP-glucose 4,6-dehydratase.
  
0.663
EPR67273.1
Alpha-1,2-mannosidase.
       0.649
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.