STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR67058.1Hypothetical protein. (425 aa)    
Predicted Functional Partners:
EPR67057.1
5-methylthioribose kinase.
 
     0.937
EPR67056.1
5-methylthioribose kinase.
 
     0.919
EPR65177.1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.911
EPR67059.1
Sodium-dependent transporter.
       0.625
EPR67342.1
Transporter, solute:sodium symporter (SSS) family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.569
EPR67994.1
Putative periplasmic protein.
  
     0.505
EPR67055.1
Fe-S protein.
       0.477
EPR68750.1
Hypothetical protein.
  
     0.462
EPR67716.1
Hypothetical protein.
  
     0.440
EPR66880.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.