STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66680.1Beta-hexosaminidase precursor. (713 aa)    
Predicted Functional Partners:
EPR66681.1
Sulfatases-like protein.
 
     0.917
EPR66682.1
Hypothetical protein.
 
     0.917
EPR66683.1
Putative protein-signal peptide and transmembrane prediction.
 
     0.874
EPR66684.1
Hypothetical protein.
 
     0.843
EPR70443.1
Hypothetical protein.
 
     0.775
EPR67636.1
Hypothetical protein.
 
     0.774
EPR69854.1
Hypothetical protein.
 
     0.771
EPR68069.1
Hypothetical protein.
 
     0.771
EPR71440.1
Hypothetical protein.
 
     0.770
EPR66989.1
Sulfatases-like protein.
 
     0.762
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.