STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66604.1Hypothetical protein. (620 aa)    
Predicted Functional Partners:
EPR66603.1
N-acetylglucosamine related transporter, NagX.
       0.777
EPR65504.1
Beta-galactosidase.
 
    0.774
EPR71399.1
Hypothetical protein.
 
     0.761
EPR69537.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 43 family.
    0.744
EPR69239.1
Alpha,alpha-trehalose-phosphate synthase; Trehalose-6-phosphate phosphatase.
  
 
 0.714
EPR71522.1
Putative large secreted protein.
  
 
  0.710
EPR69662.1
Xylose isomerase domain protein TIM barrel.
 
    0.675
EPR67096.1
TonB-dependent receptor.
  
     0.554
EPR67301.1
Hypothetical protein.
  
     0.539
EPR66602.1
Beta-hexosaminidase.
       0.529
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.