STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66625.12-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. (333 aa)    
Predicted Functional Partners:
EPR66935.1
Long-chain-fatty-acid--CoA ligase.
 
 
 0.897
EPR67781.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
  
 
 0.701
EPR68835.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
  
 
 0.659
EPR66653.1
GMP synthase.
   
  0.649
EPR66654.1
GMP synthase.
   
  0.649
EPR70534.1
Molybdopterin binding protein; C-terminal domain of CinA type S; Belongs to the CinA family.
    
  0.648
EPR67079.1
Inosine-5'-monophosphate dehydrogenase.
  
 
 0.645
EPR71153.1
2-oxoglutarate oxidoreductase; Overlaps another CDS with the same product name.
   
 
  0.624
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.613
EPR67537.1
Putative zinc-binding dehydrogenase.
   
 
  0.588
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.