STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66640.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
ung
Uracil-DNA glycosylase, family 1; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.667
EPR67481.1
Single-stranded DNA-binding protein.
    
   0.615
EPR66405.1
Single-stranded DNA-binding protein.
    
   0.615
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
    0.539
EPR66638.1
591aa hypothetical protein: FIG00906767.
    
  0.511
EPR69893.1
TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
    0.497
EPR69894.1
TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
    0.497
EPR66639.1
Myo-inositol 2-dehydrogenase.
       0.486
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.