STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66236.1ABC transporter efflux protein. (414 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  0.952
EPR65360.1
ABC transporter ATP-binding protein.
  0.929
EPR68080.1
ABC transporter, ATP-binding protein.
  0.915
EPR68089.1
ABC transporter ATP-binding protein.
 
  0.882
EPR66023.1
Cell division transporter, ATP-binding protein FtsE; TCDB 3.A.5.1.1.
 
  0.850
EPR65359.1
Macrolide-specific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.815
EPR68845.1
ABC transporter, ATP-binding protein.
 
  0.809
EPR67830.1
Macrolide-specific efflux protein MacA.
  
    0.808
EPR66235.1
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site.
       0.765
EPR68420.1
Putative membrane fusion protein.
 
   0.759
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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