STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66265.1Hypothetical protein. (754 aa)    
Predicted Functional Partners:
EPR71522.1
Putative large secreted protein.
 
  
  0.677
EPR66266.1
Hypothetical protein.
  
 
  0.583
EPR66267.1
Hypothetical protein.
  
 
  0.583
EPR65909.1
Beta-hexosaminidase precursor.
  
     0.542
EPR68042.1
Hypothetical protein.
  
     0.538
EPR66264.1
COG3866 Pectate lyase.
       0.517
EPR65908.1
Hypothetical protein.
  
     0.482
EPR66268.1
PA14 domain protein.
 
     0.449
EPR66263.1
Hypothetical protein.
       0.411
EPR68148.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.