STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66268.1PA14 domain protein. (625 aa)    
Predicted Functional Partners:
EPR70550.1
Putative signal transduction histidine kinase.
  
 
 0.676
EPR70551.1
Histidine kinase sensor protein.
  
 
 0.676
EPR68004.1
Hypothetical protein.
  
 
 0.676
EPR68104.1
Hypothetical protein.
   
 
 0.645
EPR65028.1
PAS domain protein.
   
 
 0.645
EPR69574.1
Hypothetical protein.
   
 
 0.643
EPR66981.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
   
 
 0.643
EPR69272.1
Multi-sensor hybrid histidine kinase.
   
 
 0.642
EPR67075.1
Adenylate cyclase.
   
  0.642
EPR67076.1
Adenylate cyclase.
    
  0.638
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.