STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66063.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
EPR69597.1
Hypothetical protein.
  
 
 0.514
EPR66062.1
Small-conductance mechanosensitive channel.
       0.511
EPR71568.1
Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
  0.504
EPR69471.1
Glycerol-3-phosphate dehydrogenase.
     
 0.490
EPR71643.1
Non-hemolytic phospholipase C.
     
 0.482
EPR71338.1
Hypothetical protein.
    
  0.480
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.476
EPR68239.1
Putative lipoprotein signal peptide.
    
 0.473
EPR67951.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
  0.473
EPR66061.1
Two-component system sensor histidine kinase.
 
    0.459
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.