STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66108.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
EPR70550.1
Putative signal transduction histidine kinase.
    
  0.629
EPR70551.1
Histidine kinase sensor protein.
    
  0.629
EPR68004.1
Hypothetical protein.
    
  0.629
EPR68534.1
Sensory box histidine kinase/response regulator.
    
  0.620
EPR65028.1
PAS domain protein.
    
 0.572
EPR66109.1
NADH dehydrogenase.
       0.531
EPR69267.1
Hypothetical protein.
  
     0.505
EPR66110.1
NADH dehydrogenase.
       0.491
EPR66107.1
Glycosyltransferase.
       0.463
EPR65118.1
Response regulator.
  
     0.433
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.