Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EPR66209.1 | EPR66210.1 | ADICYQ_4907 | ADICYQ_4908 | Putative aggregation factor core protein MAFp3, isoform C. | DNA repair and recombination protein, putative helicase. | 0.492 |
EPR66210.1 | EPR66209.1 | ADICYQ_4908 | ADICYQ_4907 | DNA repair and recombination protein, putative helicase. | Putative aggregation factor core protein MAFp3, isoform C. | 0.492 |
EPR66210.1 | EPR66211.1 | ADICYQ_4908 | ADICYQ_4909 | DNA repair and recombination protein, putative helicase. | Hypothetical protein. | 0.448 |
EPR66210.1 | EPR66817.1 | ADICYQ_4908 | ADICYQ_4078 | DNA repair and recombination protein, putative helicase. | ATP-dependent helicase. | 0.699 |
EPR66210.1 | EPR66818.1 | ADICYQ_4908 | ADICYQ_4079 | DNA repair and recombination protein, putative helicase. | Putative helicase. | 0.699 |
EPR66210.1 | EPR66894.1 | ADICYQ_4908 | ADICYQ_4155 | DNA repair and recombination protein, putative helicase. | ATP-dependent DNA helicase RecQ. | 0.932 |
EPR66210.1 | EPR67413.1 | ADICYQ_4908 | ADICYQ_3437 | DNA repair and recombination protein, putative helicase. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.870 |
EPR66210.1 | EPR69599.1 | ADICYQ_4908 | ADICYQ_1384 | DNA repair and recombination protein, putative helicase. | ATP-dependent DNA helicase RecQ. | 0.425 |
EPR66210.1 | EPR70149.1 | ADICYQ_4908 | ADICYQ_1033 | DNA repair and recombination protein, putative helicase. | DNA topoisomerase III. | 0.484 |
EPR66210.1 | recA | ADICYQ_4908 | ADICYQ_3037 | DNA repair and recombination protein, putative helicase. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.446 |
EPR66210.1 | truB | ADICYQ_4908 | ADICYQ_3203 | DNA repair and recombination protein, putative helicase. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.775 |
EPR66211.1 | EPR66210.1 | ADICYQ_4909 | ADICYQ_4908 | Hypothetical protein. | DNA repair and recombination protein, putative helicase. | 0.448 |
EPR66817.1 | EPR66210.1 | ADICYQ_4078 | ADICYQ_4908 | ATP-dependent helicase. | DNA repair and recombination protein, putative helicase. | 0.699 |
EPR66817.1 | EPR66818.1 | ADICYQ_4078 | ADICYQ_4079 | ATP-dependent helicase. | Putative helicase. | 0.993 |
EPR66817.1 | EPR66894.1 | ADICYQ_4078 | ADICYQ_4155 | ATP-dependent helicase. | ATP-dependent DNA helicase RecQ. | 0.743 |
EPR66817.1 | EPR69599.1 | ADICYQ_4078 | ADICYQ_1384 | ATP-dependent helicase. | ATP-dependent DNA helicase RecQ. | 0.400 |
EPR66817.1 | recA | ADICYQ_4078 | ADICYQ_3037 | ATP-dependent helicase. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.444 |
EPR66818.1 | EPR66210.1 | ADICYQ_4079 | ADICYQ_4908 | Putative helicase. | DNA repair and recombination protein, putative helicase. | 0.699 |
EPR66818.1 | EPR66817.1 | ADICYQ_4079 | ADICYQ_4078 | Putative helicase. | ATP-dependent helicase. | 0.993 |
EPR66818.1 | EPR66894.1 | ADICYQ_4079 | ADICYQ_4155 | Putative helicase. | ATP-dependent DNA helicase RecQ. | 0.743 |
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