STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR66030.1Hypothetical protein. (686 aa)    
Predicted Functional Partners:
EPR69231.1
Hypothetical protein.
  
  
  0.774
EPR68900.1
Hypothetical protein.
  
  
  0.771
EPR67025.1
Hypothetical protein.
  
  
  0.770
EPR69228.1
Hypothetical protein.
 
     0.627
EPR71522.1
Putative large secreted protein.
    
  0.626
EPR65713.1
Purple acid phosphatase.
  
     0.598
EPR71475.1
Hypothetical protein.
  
  
  0.592
EPR69226.1
Heparinase II/III family protein.
  
  
  0.577
EPR69662.1
Xylose isomerase domain protein TIM barrel.
  
     0.570
EPR66031.1
Arylsulfatase.
       0.568
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.