STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR65909.1Beta-hexosaminidase precursor. (468 aa)    
Predicted Functional Partners:
EPR65908.1
Hypothetical protein.
     0.971
EPR70560.1
Beta-hexosaminidase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
    
  0.630
EPR70561.1
Beta-hexosaminidase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
    
  0.630
EPR68889.1
Beta-hexosaminidase.
    
  0.630
EPR66265.1
Hypothetical protein.
  
     0.542
EPR69383.1
Hypothetical protein.
  
     0.504
EPR67851.1
Glucosamine-6-phosphate deaminase.
  
     0.500
EPR67997.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.499
EPR68338.1
Alpha-L-fucosidase.
 
  
 0.494
EPR71400.1
Hypothetical protein.
  
     0.493
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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