Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EPR65086.1 | EPR65915.1 | ADICYQ_5896 | ADICYQ_5060 | Hypothetical protein. | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | 0.987 |
EPR65086.1 | EPR65916.1 | ADICYQ_5896 | ADICYQ_5061 | Hypothetical protein. | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | 0.987 |
EPR65086.1 | EPR65917.1 | ADICYQ_5896 | ADICYQ_5062 | Hypothetical protein. | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | 0.987 |
EPR65086.1 | EPR66660.1 | ADICYQ_5896 | ADICYQ_4247 | Hypothetical protein. | Hypothetical protein. | 0.572 |
EPR65086.1 | EPR66661.1 | ADICYQ_5896 | ADICYQ_4248 | Hypothetical protein. | Hypothetical protein. | 0.572 |
EPR65086.1 | EPR66894.1 | ADICYQ_5896 | ADICYQ_4155 | Hypothetical protein. | ATP-dependent DNA helicase RecQ. | 0.697 |
EPR65086.1 | EPR67413.1 | ADICYQ_5896 | ADICYQ_3437 | Hypothetical protein. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.995 |
EPR65086.1 | EPR69082.1 | ADICYQ_5896 | ADICYQ_1854 | Hypothetical protein. | Hypothetical protein. | 0.572 |
EPR65086.1 | recA | ADICYQ_5896 | ADICYQ_3037 | Hypothetical protein. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.936 |
EPR65086.1 | sbcD | ADICYQ_5896 | ADICYQ_0296 | Hypothetical protein. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.572 |
EPR65915.1 | EPR65086.1 | ADICYQ_5060 | ADICYQ_5896 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | Hypothetical protein. | 0.987 |
EPR65915.1 | EPR65916.1 | ADICYQ_5060 | ADICYQ_5061 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | 0.999 |
EPR65915.1 | EPR65917.1 | ADICYQ_5060 | ADICYQ_5062 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | 0.999 |
EPR65915.1 | EPR66660.1 | ADICYQ_5060 | ADICYQ_4247 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | Hypothetical protein. | 0.974 |
EPR65915.1 | EPR66661.1 | ADICYQ_5060 | ADICYQ_4248 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | Hypothetical protein. | 0.974 |
EPR65915.1 | EPR66894.1 | ADICYQ_5060 | ADICYQ_4155 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | ATP-dependent DNA helicase RecQ. | 0.977 |
EPR65915.1 | EPR67413.1 | ADICYQ_5060 | ADICYQ_3437 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.998 |
EPR65915.1 | EPR69082.1 | ADICYQ_5060 | ADICYQ_1854 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | Hypothetical protein. | 0.974 |
EPR65915.1 | recA | ADICYQ_5060 | ADICYQ_3037 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.987 |
EPR65915.1 | sbcD | ADICYQ_5060 | ADICYQ_0296 | DNA polymerase I; Overlaps CDS with the same product name; overlaps another CDS with the same product name. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.974 |
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