STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR65458.1Hypothetical protein. (663 aa)    
Predicted Functional Partners:
EPR71381.1
Hypothetical protein.
  
     0.765
EPR71378.1
Hypothetical protein.
  
     0.761
EPR71380.1
Putative membrane protein.
  
     0.755
EPR65457.1
Hypothetical protein.
       0.732
EPR71373.1
Putative transmembrane glycosyltransferase.
  
     0.677
EPR71377.1
Putative outer membrane efflux protein.
  
    0.669
EPR65513.1
Hypothetical protein.
  
  0.647
EPR70575.1
TonB-dependent receptor.
  
  0.629
EPR67535.1
Putative glycosyltransferase.
  
     0.628
EPR71383.1
Glycosyltransferase.
  
     0.615
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.