STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR65344.1Hypothetical protein. (592 aa)    
Predicted Functional Partners:
EPR70204.1
Hypothetical protein.
 
     0.821
EPR69862.1
Hypothetical protein.
  
     0.713
EPR65892.1
Hypothetical protein.
  
     0.708
EPR65891.1
Hypothetical protein.
  
     0.707
EPR68206.1
Hypothetical protein.
  
     0.703
EPR70550.1
Putative signal transduction histidine kinase.
  
 
 0.676
EPR70551.1
Histidine kinase sensor protein.
  
 
 0.676
EPR68004.1
Hypothetical protein.
  
 
 0.676
EPR68552.1
Hypothetical protein.
  
     0.668
EPR68553.1
Hypothetical protein.
  
     0.667
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.