STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR65249.1Hypothetical protein. (1488 aa)    
Predicted Functional Partners:
EPR67948.1
Hypothetical protein.
 
 
 0.938
EPR69521.1
Putative outer membrane protein, OMP85 family.
 
 
 0.855
EPR65986.1
Hypothetical protein.
 
   
 0.780
EPR66238.1
Hypothetical protein.
  
     0.773
EPR69515.1
Gliding motility-related protein.
  
     0.772
EPR66655.1
LysM-repeat protein.
 
     0.767
EPR68450.1
Cell division protein FtsQ.
  
     0.760
EPR68819.1
Hypothetical protein.
  
     0.754
EPR66606.1
Hypothetical protein.
  
     0.751
EPR69508.1
TPR domain protein.
  
     0.748
Your Current Organism:
Cyclobacterium qasimii
NCBI taxonomy Id: 641524
Other names: C. qasimii M12-11B, Cyclobacterium qasimii M12-11B, Cyclobacterium sp. M12-11B
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.