STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR74845.1Putative lipase/esterase. (294 aa)    
Predicted Functional Partners:
EPR74844.1
Arabinan endo-1,5-alpha-L-arabinosidase A.
 
  
  0.949
EPR69755.1
4Fe-4S ferredoxin.
   
   0.740
EPR74849.1
Hypothetical protein.
 
     0.720
EPR74852.1
Putative outer membrane protein.
 
  
  0.696
EPR74850.1
Hypothetical protein.
 
     0.688
EPR74851.1
Hypothetical protein.
 
     0.681
EPR72801.1
NADP-dependent malic enzyme.
    
  0.681
EPR74854.1
Hypothetical protein.
 
     0.676
EPR74853.1
TonB-dependent receptor.
 
     0.667
EPR74089.1
Long-chain-fatty-acid--CoA ligase; Overlaps another CDS with the same product name.
   
 
 0.651
Your Current Organism:
Winogradskyella psychrotolerans
NCBI taxonomy Id: 641526
Other names: W. psychrotolerans RS-3, Winogradskyella psychrotolerans RS-3, Winogradskyella sp. RS-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.